Sam Stubbs headed the Bantams into an early lead, converting Richie Smallwood’s free-kick after five minutes.
Ethan Ebanks-Landell then headed Smallwood’s free-kick into his own net in the 74th minute before Scott Banks’ deflected 82nd-minute effort completed the scoring.
“Teams above us were well ahead for a long time but we’ve managed to claw that back and now we’re just looking forward to the next game,” said Hughes.
“We’re in a good position, in good heart, we’re really strong at the minute and we’re looking like a team that is hopefully going to achieve something.
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